Gilles Carpentier Research Web Site: Computer Image Analysis
Image analysis tools in biology and biochemistry using ImageJ

Home > Protein Array Analyzer for ImageJ

Protein Array Analyzer for ImageJ

Friday 15 October 2010, by Gilles Carpentier

  Table of contents  


Select "Protein Array Analyzer" by clicking on the "toolsets" menu icon (>>) of the ImageJ tool bar.

If the tool isn’t visible in the list, download the file (here) in the "ImageJ/macros/toolset" folder. This can be done manually, or automatically using the "Luts Macros and Tools Updater".

The ImageJ tool bar aspect should be as showed below:

If ImageJ shows a message requiring a more recent version during the installation of the toolset, update ImageJ, using the "Help -> Update ImageJ..." menu, or replace manually the ij.jar file, available here.

Known problem:

Sometimes (rare) an empty "Results" window appears when the "auto size" function of the graphical interface is activated. Restart ImageJ in that case.

logoij ImageJ ( is a public domain Java image processing program inspired by NIH Image for the Macintosh. It runs, either as an online applet or as a downloadable application, on any computer with a Java 1.1 or later virtual machine. Downloadable distributions are available for Windows, Mac OS, Mac OS X and Linux. The author, Wayne Rasband (, is at the Research Services Branch, National Institute of Mental Health, Bethesda, Maryland, USA.
Gilles Carpentier, Faculte des Sciences et Technologie,
Universite Paris Est Creteil Val-de-Marne, France.

Special thanks to Alessandra Albano for the English correction of these sites.
Computer Data Acquisition
for Biochemistry Practice Works
Image analysis tools in biology
and biochemistry using ImageJ